Gene: AT2G16230
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G16230
- Transcript Identifier AT2G16230.1
- Gene Type Coding gene
- Location Chr2 : 7035463-7038326 : negative
Gene Family Information
- ID HOM05D000020
- #Genes/#Species 6649/98
- Phylogenetic origin
- ID ORTHO05D003131
- #Genes/#Species 242/91
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT2G16230.1
- uniprot F4IKB3
Descriptions
- Description O-Glycosyl hydrolases family 17 protein
- Computational description O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G34480.1); Has 576 Blast hits to 566 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 5; Plants - 566; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005975 | IEA | Gene Ontology | carbohydrate metabolic process | |
GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
GO:0008152 | IEA | GOA Database | metabolic process |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0042973 | IEA | Gene Ontology | glucan endo-1,3-beta-D-glucosidase activity | |
GO:0016798 | IEA | GOA Database | hydrolase activity, acting on glycosyl bonds | |
GO:0016787 | IEA | GOA Database | hydrolase activity | |
GO:0004553 | IEA | GOA Database | hydrolase activity, hydrolyzing O-glycosyl compounds | |
GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005886 | ISM | Gene Ontology | plasma membrane | |
GO:0046658 | IBA | Gene Ontology | anchored component of plasma membrane | 1 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
50.3.2 | Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase |