Gene: AT2G16060
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G16060
- Transcript Identifier AT2G16060.1
- Gene Type Coding gene
- Location Chr2 : 6982782-6983522 : negative
Gene Family Information
- ID HOM05D001401
- #Genes/#Species 447/96
- Phylogenetic origin
- ID ORTHO05D002222
- #Genes/#Species 306/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT2G16060.1
- symbol HB1
- Alias AHB1,hemoglobin 1,ARATH GLB1,ATGLB1,GLB1,CLASS I HEMOGLOBIN,NSHB1
- uniprot O24520
Descriptions
- Description hemoglobin 1
- Computational description hemoglobin 1 (HB1); FUNCTIONS IN: oxygen binding; INVOLVED IN: response to hypoxia; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leghaemoglobin (InterPro:IPR001032), Globin-like (InterPro:IPR009050), Leghaemoglobin, iron-binding site (InterPro:IPR019824), Globin, subset (InterPro:IPR000971), Globin (InterPro:IPR012292); BEST Arabidopsis thaliana protein match is: haemoglobin 2 (TAIR:AT3G10520.1); Has 783 Blast hits to 745 proteins in 194 species: Archae - 0; Bacteria - 173; Metazoa - 274; Fungi - 3; Plants - 318; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0001666 | TAS | Gene Ontology | response to hypoxia | 1 |
| GO:0071456 | HEP | Gene Ontology | cellular response to hypoxia | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019825 | IEA | GOA Database | oxygen binding | |
| GO:0019825 | IDA | Gene Ontology | oxygen binding | 1 |
| GO:0019825 | IEA | InterPro | oxygen binding | |
| GO:0020037 | IEA | Gene Ontology | heme binding | |
| GO:0020037 | IEA | InterPro | heme binding | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0005344 | IDA | Gene Ontology | oxygen carrier activity | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | IDA | GOA Database | plasmodesma | |
| GO:0009506 | HDA | Gene Ontology | plasmodesma | 3 |
| GO:0005829 | IDA | GOA Database | cytosol | |
| GO:0005829 | HDA | Gene Ontology | cytosol | 4 |
| GO:0005886 | IDA | GOA Database | plasma membrane | |
| GO:0005886 | HDA | Gene Ontology | plasma membrane | 5 |
| GO:0005618 | IDA | GOA Database | cell wall | |
| GO:0005737 | ISM | Gene Ontology | cytoplasm | |
| GO:0009505 | HDA | Gene Ontology | plant-type cell wall | 6 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |