Gene: AT2G05900

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G05900
  • Transcript Identifier AT2G05900.1
  • Gene Type Coding gene
  • Location Chr2 : 2256970-2257908 : positive

Gene Family Information

  • ID HOM05D000268
  • #Genes/#Species 1624/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G05900.1
  • symbol SDG11
  • Alias SUVH10,SU(VAR)3-9 HOMOLOG 10
  • uniprot Q3EC60

Descriptions

  • Description SET domain protein 11
  • Computational description SET domain protein 11 (SDG11); FUNCTIONS IN: zinc ion binding, histone-lysine N-methyltransferase activity; INVOLVED IN: chromatin modification; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), SRA-YDG (InterPro:IPR003105), Pre-SET domain (InterPro:IPR007728); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 3 (TAIR:AT1G73100.1); Has 2906 Blast hits to 2667 proteins in 280 species: Archae - 0; Bacteria - 89; Metazoa - 1281; Fungi - 322; Plants - 960; Viruses - 0; Other Eukaryotes - 254 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006325
IEA
GOA Databasechromatin organization
GO:0034968
ISO
PLAZA Homology (enrichment)histone lysine methylation HOM05D000268

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0005515
IEA
InterProprotein binding
GO:0008270
ISO
PLAZA Homology (enrichment)zinc ion binding HOM05D000268
GO:0018024
ISO
PLAZA Homology (enrichment)histone-lysine N-methyltransferase activity HOM05D000268

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0000775
IEA
GOA Databasechromosome, centromeric region
GO:0005694
IEA
GOA Databasechromosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003105 SRA-YDG
IPR015947 PUA-like superfamily
IPR036987 SRA-YDG superfamily
IPR001214 SET domain
Mapman id Description
35.1 not assigned.annotated