Gene: AT2G05220

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G05220
  • Transcript Identifier AT2G05220.1
  • Gene Type Coding gene
  • Location Chr2 : 1894757-1895179 : negative

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G05220.1
  • uniprot Q9SJ36

Descriptions

  • Description Ribosomal S17 family protein
  • Computational description Ribosomal S17 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome; CONTAINS InterPro DOMAIN/s: Ribosomal protein S17e (InterPro:IPR001210), Ribosomal protein S17e, conserved site (InterPro:IPR018273); BEST Arabidopsis thaliana protein match is: Ribosomal S17 family protein (TAIR:AT5G04800.4); Has 1004 Blast hits to 1004 proteins in 349 species: Archae - 194; Bacteria - 0; Metazoa - 361; Fungi - 144; Plants - 127; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
Gene Ontologytranslation
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D000001
GO:0003735
IDA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003729
IDA
Gene OntologymRNA binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0022627
IDA
GOA Databasecytosolic small ribosomal subunit
GO:0022627
HDA
Gene Ontologycytosolic small ribosomal subunit2
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G04390
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT2G04390
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005739
HDA
Gene Ontologymitochondrion3
GO:0005794
RCA
Gene OntologyGolgi apparatus4
GO:0005829
RCA
Gene Ontologycytosol5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001210 Ribosomal protein S17e
IPR036401 Ribosomal protein S17e-like superfamily
Mapman id Description
17.1.3.1.19 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS17