Gene: AT2G05100

General Information

Computational description photosystem II light harvesting complex gene 2.1 (LHCB2.1); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: response to salt stress, response to blue light, response to red light, response to far red light, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: 12 plant structures; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem II light harvesting complex gene 2.2 (TAIR:AT2G05070.1); Has 2375 Blast hits to 2314 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2059; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink).

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0010218	IDA	Gene Ontology	response to far red light	1
GO:0009416	IDA IBA	Gene Ontology	response to light stimulus	2 3
GO:0009768	IDA, IMP IBA	Gene Ontology	photosynthesis, light harvesting in photosystem I	2 3 4
GO:0010114	IDA, IMP	Gene Ontology	response to red light	1 4
GO:0015979	IEA	GOA Database	photosynthesis
GO:0018298	IEA	GOA Database	protein-chromophore linkage
GO:0009765	IEA	Gene Ontology	photosynthesis, light harvesting
GO:0009765	IEA	InterPro	photosynthesis, light harvesting
GO:0009409	IEP	Gene Ontology	response to cold	5
GO:0030104	ISS	Gene Ontology	water homeostasis
GO:0071215	ISS	Gene Ontology	cellular response to abscisic acid stimulus
GO:0090333	ISS	Gene Ontology	regulation of stomatal closure
GO:1903428	ISS	Gene Ontology	positive regulation of reactive oxygen species biosynthetic process
GO:0009645	IEP	Gene Ontology	response to low light intensity stimulus	6
GO:0009269	IEP	Gene Ontology	response to desiccation	5
GO:0009644	IEP	Gene Ontology	response to high light intensity	5
GO:0009769	IDA, IMP	Gene Ontology	photosynthesis, light harvesting in photosystem II	3 4

GO term	Evidence(s)	Provider(s)	Description
GO:0019904	IPI	GOA Database	protein domain specific binding
GO:0046872	IEA	GOA Database	metal ion binding
GO:0016168	IEA	GOA Database	chlorophyll binding
GO:0016168	ISS	Gene Ontology	chlorophyll binding

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009523	IEA	GOA Database	photosystem II
GO:0009523	IDA	Gene Ontology	photosystem II	7
GO:0005739	HDA	Gene Ontology	mitochondrion	8
GO:0009535	IEA	GOA Database	chloroplast thylakoid membrane
GO:0009535	IDA, HDA IBA	Gene Ontology	chloroplast thylakoid membrane	2 3 9
GO:0010287	IDA	GOA Database	plastoglobule
GO:0010287	IBA	Gene Ontology	plastoglobule	2
GO:0009941	IDA	GOA Database	chloroplast envelope
GO:0009941	HDA IBA	Gene Ontology	chloroplast envelope	2 10
GO:0009507	IDA IEA	GOA Database	chloroplast
GO:0009507	HDA ISM	Gene Ontology	chloroplast	11
GO:0009579	IDA IEA	GOA Database	thylakoid
GO:0009579	HDA	Gene Ontology	thylakoid	12
GO:0009522	IEA	GOA Database	photosystem I
GO:0009522	IDA	Gene Ontology	photosystem I	7
GO:0009536	IEA	GOA Database	plastid
GO:0016021	IEA	GOA Database	integral component of membrane
GO:0016020	IEA	GOA Database	membrane
GO:0016020	IEA	InterPro	membrane
GO:0005794	RCA	Gene Ontology	Golgi apparatus	13
GO:0009517	IDA, IMP	Gene Ontology	PSII associated light-harvesting complex II	4 7

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR001344	Chlorophyll A-B binding protein, plant and chromista
IPR023329	Chlorophyll a/b binding domain superfamily
IPR022796	Chlorophyll A-B binding protein

Mapman id	Description
1.1.1.1.1	Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.component LHCb1/2/3