Gene: AT2G05070
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G05070
- Transcript Identifier AT2G05070.1
- Gene Type Coding gene
- Location Chr2 : 1799436-1800329 : negative
Gene Family Information
- ID HOM05D000133
- #Genes/#Species 2666/99
- Phylogenetic origin
- ID ORTHO05D000259
- #Genes/#Species 1252/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT2G05070.1
- symbol LHCB2.2
- Alias LHCB2,LIGHT-HARVESTING CHLOROPHYLL B-BINDING 2
- full_name photosystem II light harvesting complex gene 2.2
- uniprot Q9S7J7
Descriptions
- Description photosystem II light harvesting complex protein 2.2
- Computational description photosystem II light harvesting complex gene 2.2 (LHCB2.2); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting, photosynthesis; LOCATED IN: in 7 components; EXPRESSED IN: guard cell, juvenile leaf, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem II light harvesting complex gene 2.1 (TAIR:AT2G05100.1); Has 2376 Blast hits to 2314 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2060; Viruses - 0; Other Eukaryotes - 312 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009416 | IDA IBA | Gene Ontology | response to light stimulus | 1 2 |
GO:0009768 | IDA IBA | Gene Ontology | photosynthesis, light harvesting in photosystem I | 1 2 |
GO:0015979 | IEA | GOA Database | photosynthesis | |
GO:0018298 | IEA | GOA Database | protein-chromophore linkage | |
GO:0009765 | IEA | GOA Database | photosynthesis, light harvesting | |
GO:0009765 | IEA | InterPro | photosynthesis, light harvesting | |
GO:0030104 | IMP | Gene Ontology | water homeostasis | 3 |
GO:0071215 | IMP | Gene Ontology | cellular response to abscisic acid stimulus | 3 |
GO:0090333 | IMP | Gene Ontology | regulation of stomatal closure | 3 |
GO:1903428 | IMP | Gene Ontology | positive regulation of reactive oxygen species biosynthetic process | 3 |
GO:0009645 | IEP | Gene Ontology | response to low light intensity stimulus | 4 |
GO:0009269 | IEP | Gene Ontology | response to desiccation | 5 |
GO:0009409 | IEP | Gene Ontology | response to cold | 5 |
GO:0009644 | IEP | Gene Ontology | response to high light intensity | 5 |
GO:0009769 | IDA | Gene Ontology | photosynthesis, light harvesting in photosystem II | 6 |
GO:0010114 | IDA | Gene Ontology | response to red light | 6 |
GO:0010218 | IDA | Gene Ontology | response to far red light | 6 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003729 | IDA | Gene Ontology | mRNA binding | 7 |
GO:0046872 | IEA | GOA Database | metal ion binding | |
GO:0016168 | IEA | GOA Database | chlorophyll binding | |
GO:0016168 | ISS | Gene Ontology | chlorophyll binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009523 | IEA | GOA Database | photosystem II | |
GO:0009523 | IDA | Gene Ontology | photosystem II | 8 |
GO:0010287 | IDA | GOA Database | plastoglobule | |
GO:0010287 | HDA IBA | Gene Ontology | plastoglobule | 1 9 |
GO:0009941 | IDA | GOA Database | chloroplast envelope | |
GO:0009941 | HDA IBA | Gene Ontology | chloroplast envelope | 1 10 |
GO:0009535 | IEA | GOA Database | chloroplast thylakoid membrane | |
GO:0009535 | IDA, HDA IBA | Gene Ontology | chloroplast thylakoid membrane | 1 2 11 |
GO:0005774 | IDA | GOA Database | vacuolar membrane | |
GO:0009507 | IDA IEA | GOA Database | chloroplast | |
GO:0009507 | HDA ISM | Gene Ontology | chloroplast | 12 |
GO:0009579 | IDA IEA | GOA Database | thylakoid | |
GO:0009579 | HDA | Gene Ontology | thylakoid | 13 |
GO:0009534 | IDA | GOA Database | chloroplast thylakoid | |
GO:0009534 | HDA | Gene Ontology | chloroplast thylakoid | 14 |
GO:0005739 | HDA | Gene Ontology | mitochondrion | 15 |
GO:0009522 | IEA | GOA Database | photosystem I | |
GO:0009522 | IDA | Gene Ontology | photosystem I | 8 |
GO:0009536 | IEA | GOA Database | plastid | |
GO:0016021 | IEA | GOA Database | integral component of membrane | |
GO:0016020 | IEA | GOA Database | membrane | |
GO:0016020 | IEA | InterPro | membrane | |
GO:0005794 | RCA | Gene Ontology | Golgi apparatus | 16 |
GO:0000325 | HDA | Gene Ontology | plant-type vacuole | 17 |
GO:0009517 | IDA | Gene Ontology | PSII associated light-harvesting complex II | 8 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
1.1.1.1.1 | Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.component LHCb1/2/3 |