Gene: AT2G04240

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G04240
  • Transcript Identifier AT2G04240.1
  • Gene Type Coding gene
  • Location Chr2 : 1461816-1462304 : negative

Gene Family Information

  • ID HOM05D000341
  • #Genes/#Species 1381/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G04240.1
  • symbol XERICO
  • uniprot Q9SI09

Descriptions

  • Description RING/U-box superfamily protein
  • Computational description XERICO; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: brassinosteroid-responsive RING-H2 (TAIR:AT3G61460.1); Has 7967 Blast hits to 7952 proteins in 266 species: Archae - 0; Bacteria - 0; Metazoa - 1949; Fungi - 661; Plants - 4072; Viruses - 19; Other Eukaryotes - 1266 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
Gene Ontologyprotein ubiquitination
GO:0006970
IEP
Gene Ontologyresponse to osmotic stress1
GO:0009651
IEP
Gene Ontologyresponse to salt stress1
GO:0009687
IMP
Gene Ontologyabscisic acid metabolic process2
GO:0009739
IEP
Gene Ontologyresponse to gibberellin2
GO:0010200
IEP
GOA Databaseresponse to chitin
GO:0009688
IEA
GOA Databaseabscisic acid biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001841 Zinc finger, RING-type
IPR044249 Probable E3 ubiquitin-protein ligase XERICO-like
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
26.6.2.2 External stimuli response.salinity.gibberellin-abscisic acid signalling pathways crosstalk.ubiquitin protein ligase (XERICO)