Gene: AT1G79360

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G79360
  • Transcript Identifier AT1G79360.1
  • Gene Type Coding gene
  • Location Chr1 : 29854140-29855723 : negative

Gene Family Information

  • ID HOM05D000839
  • #Genes/#Species 711/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G79360.1
  • symbol OCT2
  • Alias ATOCT2,organic cation/carnitine transporter 2
  • uniprot O64515

Descriptions

  • Description organic cation/carnitine transporter 2
  • Computational description organic cation/carnitine transporter 2 (2-Oct); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, ion transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Organic cation transport protein (InterPro:IPR004749), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: organic cation/carnitine transporter 3 (TAIR:AT1G16390.1); Has 24066 Blast hits to 23860 proteins in 1933 species: Archae - 496; Bacteria - 11644; Metazoa - 4565; Fungi - 4772; Plants - 1707; Viruses - 0; Other Eukaryotes - 882 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0055085
IEA
Gene Ontologytransmembrane transport
GO:0055085
IEA
InterProtransmembrane transport
GO:0006811
IEA
GOA Databaseion transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015144
ISS
Gene Ontologycarbohydrate transmembrane transporter activity
GO:0022857
IEA
Gene Ontologytransmembrane transporter activity
GO:0022857
IEA
InterProtransmembrane transporter activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005524
IEA
GOA DatabaseATP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISM
Gene Ontologyplasma membrane
GO:0009705
IDA
Gene Ontologyplant-type vacuole membrane1
GO:0005774
IEA
GOA Databasevacuolar membrane
GO:0005773
IEA
GOA Databasevacuole
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IEA
InterProintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036259 MFS transporter superfamily
IPR005828 Major facilitator, sugar transporter-like
Mapman id Description
24.2.2.3.2 Solute transport.carrier-mediated transport.MFS superfamily.OCT family.organic cation transporter (OCT)