Gene: AT1G78510
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G78510
- Transcript Identifier AT1G78510.1
- Gene Type Coding gene
- Location Chr1 : 29535410-29537163 : negative
Gene Family Information
- ID HOM05D001752
- #Genes/#Species 370/100
- Phylogenetic origin
- ID ORTHO05D005237
- #Genes/#Species 162/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G78510.1
- symbol SPS1
- Alias AtSPS1
- uniprot Q8S948
Descriptions
- Description solanesyl diphosphate synthase 1
- Computational description solanesyl diphosphate synthase 1 (SPS1); CONTAINS InterPro DOMAIN/s: Solanesyl diphosphate synthase (InterPro:IPR014120), Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: solanesyl diphosphate synthase 2 (TAIR:AT1G17050.1); Has 16774 Blast hits to 16749 proteins in 2959 species: Archae - 341; Bacteria - 9542; Metazoa - 459; Fungi - 581; Plants - 425; Viruses - 0; Other Eukaryotes - 5426 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008299 | IEA | GOA Database | isoprenoid biosynthetic process | |
| GO:0008299 | IBA | Gene Ontology | isoprenoid biosynthetic process | 1 |
| GO:0008299 | IEA | InterPro | isoprenoid biosynthetic process | |
| GO:0010236 | IMP IBA | Gene Ontology | plastoquinone biosynthetic process | 1 2 |
| GO:0006744 | IMP | Gene Ontology | ubiquinone biosynthetic process | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004337 | ISO | PLAZA Integrative Orthology | geranyltranstransferase activity | Os05g0582300 |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0004659 | IBA | Gene Ontology | prenyltransferase activity | 1 |
| GO:0004311 | IEA | Gene Ontology | farnesyltranstransferase activity | |
| GO:0005515 | IPI | Gene Ontology | protein binding | 3 |
| GO:0050347 | IDA, IGI | Gene Ontology | trans-octaprenyltranstransferase activity | 4 5 |
| GO:0052924 | IEA | Gene Ontology | all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009536 | IEA | GOA Database | plastid | |
| GO:0009536 | IDA | Gene Ontology | plastid | 2 |
| GO:0009507 | IEA | GOA Database | chloroplast | |
| GO:0009507 | ISM, IBA | Gene Ontology | chloroplast | 1 |
| GO:0005739 | ISM | Gene Ontology | mitochondrion |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 7.8.2.1 | Coenzyme metabolism.prenylquinone biosynthesis.solanesyl diphosphate synthase activities.solanesyl diphosphate synthase (SPS1/2) |