Gene: AT1G78290

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G78290
  • Transcript Identifier AT1G78290.2
  • Gene Type Coding gene
  • Location Chr1 : 29457457-29458909 : negative

Gene Family Information

  • ID HOM05D000431
  • #Genes/#Species 1198/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G78290.2
  • symbol SNRK2-8
  • Alias SNRK2.8,SNF1-RELATED PROTEIN KINASE 2.8,SRK2C,SNF1-RELATED PROTEIN KINASE 2C
  • full_name SNF1-RELATED PROTEIN KINASE 2-8
  • uniprot Q9M9E9

Descriptions

  • Description Protein kinase superfamily protein
  • Computational description Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: response to karrikin; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G33950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006468
IEA
GOA Databaseprotein phosphorylation
GO:0006468
IBA
Gene Ontologyprotein phosphorylation1
GO:0006468
IEA
InterProprotein phosphorylation
GO:0016310
IEA
GOA Databasephosphorylation
GO:0080167
IEP
GOA Databaseresponse to karrikin
GO:0035556
IBA
Gene Ontologyintracellular signal transduction1
GO:0006970
IGI
Gene Ontologyresponse to osmotic stress2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016740
IEA
GOA Databasetransferase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004672
IEA
GOA Databaseprotein kinase activity
GO:0004672
IEA
InterProprotein kinase activity
GO:0016301
IEA
GOA Databasekinase activity
GO:0004674
IEA
GOA Databaseprotein serine/threonine kinase activity
GO:0004674
IBA
Gene Ontologyprotein serine/threonine kinase activity1
GO:0106310
IEA
Gene Ontologyprotein serine kinase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0106311
IEA
Gene Ontologyprotein threonine kinase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IDA
Gene Ontologycytoplasm3
GO:0005634
IDA
Gene Ontologynucleus3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011009 Protein kinase-like domain superfamily
IPR000719 Protein kinase domain
Mapman id Description
18.4.5.2 Protein modification.phosphorylation.CAMK protein kinase superfamily.SNF1-related protein kinase (SnRK2)