Gene: AT1G78230

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G78230
  • Transcript Identifier AT1G78230.1
  • Gene Type Coding gene
  • Location Chr1 : 29430226-29432516 : positive

Gene Family Information

  • ID HOM05D002278
  • #Genes/#Species 296/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G78230.1
  • uniprot F4IA60

Descriptions

  • Description Outer arm dynein light chain 1 protein
  • Computational description Outer arm dynein light chain 1 protein; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Outer arm dynein light chain 1 protein (TAIR:AT4G03260.2); Has 24271 Blast hits to 14439 proteins in 747 species: Archae - 6; Bacteria - 9514; Metazoa - 8699; Fungi - 1002; Plants - 3127; Viruses - 44; Other Eukaryotes - 1879 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019901
IBA
Gene Ontologyprotein kinase binding1
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0000325
HDA
Gene Ontologyplant-type vacuole2
GO:0005737
IBA
Gene Ontologycytoplasm1
GO:0005773
IDA
GOA Databasevacuole

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032675 Leucine-rich repeat domain superfamily
IPR003591 Leucine-rich repeat, typical subtype
IPR001611 Leucine-rich repeat
Mapman id Description
35.1 not assigned.annotated