Gene: AT1G73100

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G73100
  • Transcript Identifier AT1G73100.1
  • Gene Type Coding gene
  • Location Chr1 : 27491970-27493979 : positive

Gene Family Information

  • ID HOM05D000268
  • #Genes/#Species 1624/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G73100.1
  • symbol SUVH3
  • Alias SDG19,SET DOMAIN PROTEIN 19
  • full_name SU(VAR)3-9 homolog 3
  • uniprot Q9C5P4

Descriptions

  • Description histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3-like protein
  • Computational description SU(VAR)3-9 homolog 3 (SUVH3); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), SRA-YDG (InterPro:IPR003105), Pre-SET zinc-binding sub-group (InterPro:IPR003606), Pre-SET domain (InterPro:IPR007728), Post-SET domain (InterPro:IPR003616); BEST Arabidopsis thaliana protein match is: SU(VAR)3-9 homolog 1 (TAIR:AT5G04940.2); Has 4599 Blast hits to 4427 proteins in 402 species: Archae - 0; Bacteria - 285; Metazoa - 2284; Fungi - 494; Plants - 1115; Viruses - 0; Other Eukaryotes - 421 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034968
IEA
Gene Ontologyhistone lysine methylation
GO:0034968
IEA
InterProhistone lysine methylation
GO:0016571
IEA
GOA Databasehistone methylation
GO:0032259
IEA
GOA Databasemethylation
GO:0006325
IEA
GOA Databasechromatin organization
GO:0040029
TAS
Gene Ontologyregulation of gene expression, epigenetic1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding2
GO:0005515
IEA
InterProprotein binding
GO:0018024
IEA
InterProhistone-lysine N-methyltransferase activity
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0042054
IDA
ISS
Gene Ontologyhistone methyltransferase activity1 2
GO:0010385
IDA
Gene Ontologydouble-stranded methylated DNA binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005694
IEA
GOA Databasechromosome
GO:0005694
IDA
Gene Ontologychromosome3
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus1
GO:0005634
IEA
InterPronucleus
GO:0000775
IEA
GOA Databasechromosome, centromeric region

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007728 Pre-SET domain
IPR001214 SET domain
IPR003105 SRA-YDG
IPR036987 SRA-YDG superfamily
IPR015947 PUA-like superfamily
Mapman id Description
12.5.1.16.1 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.downstream SUVH-DNAJ methylation reader complex.methylated DNA binding component SUVH1/3