Gene: AT1G70170

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G70170
  • Transcript Identifier AT1G70170.1
  • Gene Type Coding gene
  • Location Chr1 : 26424005-26425141 : positive

Gene Family Information

  • ID HOM05D000502
  • #Genes/#Species 1063/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G70170.1
  • symbol MMP
  • uniprot O04529

Descriptions

  • Description matrix metalloproteinase
  • Computational description matrix metalloproteinase (MMP); FUNCTIONS IN: metallopeptidase activity, metalloendopeptidase activity, zinc ion binding; INVOLVED IN: proteolysis, metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase M10, metallopeptidase (InterPro:IPR001818), Peptidoglycan binding-like (InterPro:IPR002477), Peptidase M10A, cysteine switch, zinc binding site (InterPro:IPR021158), Peptidase M10A, matrix metallopeptidase (InterPro:IPR021190), Peptidase, metallopeptidase (InterPro:IPR006026); BEST Arabidopsis thaliana protein match is: Matrixin family protein (TAIR:AT1G24140.1); Has 2679 Blast hits to 2485 proteins in 220 species: Archae - 2; Bacteria - 128; Metazoa - 2206; Fungi - 4; Plants - 185; Viruses - 44; Other Eukaryotes - 110 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030198
IBA
Gene Ontologyextracellular matrix organization1
GO:0030574
IBA
Gene Ontologycollagen catabolic process1
GO:0006508
IEA
GOA Databaseproteolysis
GO:0006508
IDA
Gene Ontologyproteolysis2
GO:0006508
IEA
InterProproteolysis
GO:0050832
IMP
Gene Ontologydefense response to fungus2
GO:2000028
IMP
Gene Ontologyregulation of photoperiodism, flowering3
GO:1900056
IMP
Gene Ontologynegative regulation of leaf senescence3
GO:0080186
IMP
Gene Ontologydevelopmental vegetative growth3
GO:0046686
IEP
Gene Ontologyresponse to cadmium ion3
GO:0009753
IEP
Gene Ontologyresponse to jasmonic acid3
GO:0009651
IEP
Gene Ontologyresponse to salt stress3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0008237
IEA
GOA Databasemetallopeptidase activity
GO:0008237
IDA
Gene Ontologymetallopeptidase activity2
GO:0008237
IEA
InterPrometallopeptidase activity
GO:0008233
IEA
GOA Databasepeptidase activity
GO:0004222
IEA
GOA Databasemetalloendopeptidase activity
GO:0004222
IDA
IBA
Gene Ontologymetalloendopeptidase activity1 4
GO:0004222
IEA
InterPrometalloendopeptidase activity
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0005886
IEA
GOA Databaseplasma membrane
GO:0005886
IDA
Gene Ontologyplasma membrane2
GO:0031225
IEA
GOA Databaseanchored component of membrane
GO:0031225
TAS
Gene Ontologyanchored component of membrane5
GO:0031012
IEA
Gene Ontologyextracellular matrix
GO:0031012
IEA
InterProextracellular matrix
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0048046
IDA
Gene Ontologyapoplast2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006026 Peptidase, metallopeptidase
IPR021190 Peptidase M10A
IPR036365 PGBD-like superfamily
IPR033739 Peptidase M10A, catalytic domain
IPR002477 Peptidoglycan binding-like
IPR001818 Peptidase M10, metallopeptidase
IPR024079 Metallopeptidase, catalytic domain superfamily
Mapman id Description
19.4.5.3 Protein homeostasis.proteolysis.metallopeptidase activities.M10-class metalloprotease (Matrixin)