Gene: AT1G66580

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G66580
  • Transcript Identifier AT1G66580.1
  • Gene Type Coding gene
  • Location Chr1 : 24839208-24840439 : positive

Gene Family Information

  • ID HOM05D001838
  • #Genes/#Species 356/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G66580.1
  • symbol SAG24
  • Alias RPL10C,ribosomal protein L10 C
  • uniprot Q93W22

Descriptions

  • Description senescence associated gene 24
  • Computational description senescence associated gene 24 (SAG24); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to UV-B, translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L10e (InterPro:IPR001197), Ribosomal protein L10e/L16 (InterPro:IPR016180), Ribosomal protein L10e, conserved site (InterPro:IPR018255); BEST Arabidopsis thaliana protein match is: Ribosomal protein L16p/L10e family protein (TAIR:AT1G26910.1); Has 1679 Blast hits to 1677 proteins in 605 species: Archae - 325; Bacteria - 13; Metazoa - 562; Fungi - 162; Plants - 159; Viruses - 0; Other Eukaryotes - 458 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
Gene Ontologytranslation
GO:0006412
IEA
InterProtranslation
GO:0000027
IBA
Gene Ontologyribosomal large subunit assembly1
GO:0032502
IMP
Gene Ontologydevelopmental process2
GO:0010224
IEP
Gene Ontologyresponse to UV-B3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IDA
Gene OntologymRNA binding4
GO:0003735
IDA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IBA
Gene Ontologystructural constituent of ribosome1
GO:0003735
IEA
InterProstructural constituent of ribosome

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IPI
Gene Ontologyribosome3
GO:0005840
IEA
InterProribosome
GO:0022626
IDA
GOA Databasecytosolic ribosome
GO:0022626
HDA
Gene Ontologycytosolic ribosome5
GO:0005773
IDA
GOA Databasevacuole
GO:0005773
HDA
Gene Ontologyvacuole6
GO:0005774
IDA
GOA Databasevacuolar membrane
GO:0022625
IDA
GOA Databasecytosolic large ribosomal subunit
GO:0022625
HDA
IBA
Gene Ontologycytosolic large ribosomal subunit1 7
GO:0042788
IDA
GOA Databasepolysomal ribosome
GO:0005737
IDA
ISM
Gene Ontologycytoplasm2
GO:0005739
HDA
Gene Ontologymitochondrion8
GO:0005634
IDA
Gene Ontologynucleus2
GO:0005794
RCA
Gene OntologyGolgi apparatus9
GO:0005829
RCA
Gene Ontologycytosol10
GO:0000325
HDA
Gene Ontologyplant-type vacuole11

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001197 Ribosomal protein L10e
IPR036920 Ribosomal protein L10e/L16 superfamily
IPR016180 Ribosomal protein L10e/L16
Mapman id Description
17.1.2.1.9 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL10