Gene: AT1G65150
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G65150
- Transcript Identifier AT1G65150.2
- Gene Type Coding gene
- Location Chr1 : 24204167-24205558 : negative
Gene Family Information
- ID HOM05D000385
- #Genes/#Species 1271/84
- Phylogenetic origin
- ID ORTHO05D000269
- #Genes/#Species 1232/84
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT1G65150.2
- uniprot Q9S9J5
Descriptions
- Description TRAF-like family protein
- Computational description TRAF-like family protein; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like superfamily protein (TAIR:AT1G65050.1); Has 512 Blast hits to 426 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 4; Plants - 496; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
- Computational description TRAF-like family protein; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like superfamily protein (TAIR:AT1G65050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016579 | IBA | Gene Ontology | protein deubiquitination | 1 |
| GO:0031647 | IBA | Gene Ontology | regulation of protein stability | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004197 | IBA | Gene Ontology | cysteine-type endopeptidase activity | 1 |
| GO:0004843 | IBA | Gene Ontology | thiol-dependent deubiquitinase | 1 |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISM, IBA | Gene Ontology | nucleus | 1 |
| GO:0005829 | IBA | Gene Ontology | cytosol | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |