Gene: AT1G62440

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G62440
  • Transcript Identifier AT1G62440.1
  • Gene Type Coding gene
  • Location Chr1 : 23112933-23115293 : positive

Gene Family Information

  • ID HOM05D000546
  • #Genes/#Species 1000/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G62440.1
  • symbol LRX2
  • uniprot O48809

Descriptions

  • Description leucine-rich repeat/extensin 2
  • Computational description leucine-rich repeat/extensin 2 (LRX2); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: leucine-rich repeat/extensin 1 (TAIR:AT1G12040.1); Has 394418 Blast hits to 112735 proteins in 3055 species: Archae - 811; Bacteria - 65245; Metazoa - 131456; Fungi - 52175; Plants - 95400; Viruses - 7676; Other Eukaryotes - 41655 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000904
IGI
Gene Ontologycell morphogenesis involved in differentiation1
GO:0071555
IEA
GOA Databasecell wall organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005199
ISS
Gene Ontologystructural constituent of cell wall2
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISM
Gene Ontologyplasma membrane
GO:0009505
HDA
Gene Ontologyplant-type cell wall3
GO:0005618
IEA
GOA Databasecell wall
GO:0005576
IEA
GOA Databaseextracellular region

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032675 Leucine-rich repeat domain superfamily
IPR001611 Leucine-rich repeat
IPR013210 Leucine-rich repeat-containing N-terminal, plant-type
Mapman id Description
21.4.1.3.2 Cell wall organisation.cell wall proteins.hydroxyproline-rich glycoprotein activities.extensin activities.LRR-domain extensin