Gene: AT1G62300
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G62300
- Transcript Identifier AT1G62300.1
- Gene Type Coding gene
- Location Chr1 : 23016887-23019155 : negative
Gene Family Information
- ID HOM05D000304
- #Genes/#Species 1487/96
- Phylogenetic origin
- ID ORTHO05D000185
- #Genes/#Species 1466/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G62300.1
- symbol WRKY6
- uniprot Q9C519
Descriptions
- Description WRKY family transcription factor
- Computational description WRKY6; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G04450.1); Has 3824 Blast hits to 3363 proteins in 295 species: Archae - 0; Bacteria - 33; Metazoa - 119; Fungi - 43; Plants - 3509; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010200 | IEP | GOA Database | response to chitin | |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | Solyc02g032950.3 |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0009873 | IEA | GOA Database | ethylene-activated signaling pathway | |
| GO:0080169 | IMP | Gene Ontology | cellular response to boron-containing substance deprivation | 1 |
| GO:0045892 | IMP | Gene Ontology | negative regulation of transcription, DNA-templated | 2 |
| GO:0016036 | IMP | Gene Ontology | cellular response to phosphate starvation | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043565 | IEA | GOA Database | sequence-specific DNA binding | |
| GO:0043565 | IEA | InterPro | sequence-specific DNA binding | |
| GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003700 | IMP ISS | Gene Ontology | DNA-binding transcription factor activity | 2 |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0000976 | IDA, IPI | Gene Ontology | transcription cis-regulatory region binding | 2 3 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 4 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM | Gene Ontology | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.22.1 | RNA biosynthesis.transcriptional regulation.WRKY transcription factor activity.transcription factor (WRKY) |