Gene: AT1G60950

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G60950
  • Transcript Identifier AT1G60950.1
  • Gene Type Coding gene
  • Location Chr1 : 22444565-22445011 : positive

Gene Family Information

  • ID HOM05D001025
  • #Genes/#Species 592/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G60950.1
  • symbol FED A
  • uniprot P16972

Descriptions

  • Description 2Fe-2S ferredoxin-like superfamily protein
  • Computational description FED A; FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: photosynthetic electron transport chain, response to light stimulus; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), Ferredoxin (InterPro:IPR001041), Ferredoxin [2Fe-2S], plant (InterPro:IPR010241), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: ferredoxin 1 (TAIR:AT1G10960.1); Has 7652 Blast hits to 7650 proteins in 1365 species: Archae - 135; Bacteria - 5670; Metazoa - 7; Fungi - 12; Plants - 625; Viruses - 5; Other Eukaryotes - 1198 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015979
ISO
PLAZA Integrative Orthologyphotosynthesis Zm00001eb260140
GO:0022900
IEA
GOA Databaseelectron transport chain
GO:0022900
IEA
InterProelectron transport chain
GO:0009643
IMP
Gene Ontologyphotosynthetic acclimation1
GO:0009767
IMP
TAS
Gene Ontologyphotosynthetic electron transport chain2 3
GO:0009416
IEP
Gene Ontologyresponse to light stimulus2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051537
IEA
GOA Database2 iron, 2 sulfur cluster binding
GO:0051537
IEA
InterPro2 iron, 2 sulfur cluster binding
GO:0009055
IEA
Gene Ontologyelectron transfer activity
GO:0009055
IEA
InterProelectron transfer activity
GO:0051536
IEA
GOA Databaseiron-sulfur cluster binding
GO:0051536
IEA
InterProiron-sulfur cluster binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0005515
IPI
Gene Ontologyprotein binding4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM, IBA
Gene Ontologychloroplast5 6
GO:0009536
IEA
GOA Databaseplastid
GO:0009570
TAS
Gene Ontologychloroplast stroma2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain
IPR012675 Beta-grasp domain superfamily
IPR010241 Ferredoxin [2Fe-2S], plant
IPR036010 2Fe-2S ferredoxin-like superfamily
Mapman id Description
1.1.5.1.1 Photosynthesis.photophosphorylation.linear electron flow.ferredoxin electron carrier activities.NADP-reduction-targeted ferredoxin (Fd)