Gene: AT1G55970

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G55970
  • Transcript Identifier AT1G55970.2
  • Gene Type Coding gene
  • Location Chr1 : 20932451-20938290 : negative

Gene Family Information

  • ID HOM05D000912
  • #Genes/#Species 657/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G55970.2
  • symbol HAC4
  • Alias HAC04,HAC6,HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 6,HAG04,HISTONE ACETYLTRANSFERASE OF THE GNAT/MYST SUPERFAMILY 04,HAG4,HISTONE ACETYLTRANSFERASE OF THE GNAT/MYST SUPERFAMILY 4
  • uniprot Q9LG11

Descriptions

  • Description histone acetyltransferase of the CBP family 4
  • Computational description histone acetyltransferase of the CBP family 4 (HAC4); FUNCTIONS IN: histone acetyltransferase activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, TAZ-type (InterPro:IPR000197), Histone H3-K56 acetyltransferase, RTT109 (InterPro:IPR013178), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, ZZ-type (InterPro:IPR000433), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 5 (TAIR:AT3G12980.1); Has 778 Blast hits to 575 proteins in 103 species: Archae - 0; Bacteria - 0; Metazoa - 394; Fungi - 19; Plants - 254; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016573
ISS, IBA
IEA
Gene Ontologyhistone acetylation1 2
GO:0016573
IEA
InterProhistone acetylation
GO:0006355
IEA
Gene Ontologyregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006325
IEA
GOA Databasechromatin organization
GO:0045944
IBA
Gene Ontologypositive regulation of transcription by RNA polymerase II2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0004402
ISS, IBA
IEA
Gene Ontologyhistone acetyltransferase activity1 2
GO:0004402
IEA
InterProhistone acetyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016746
IEA
GOA Databaseacyltransferase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003713
IBA
Gene Ontologytranscription coactivator activity2
GO:0031490
IBA
Gene Ontologychromatin DNA binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005667
IBA
Gene Ontologytranscription regulator complex2
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0000123
IBA
Gene Ontologyhistone acetyltransferase complex2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035898 TAZ domain superfamily
IPR043145 Zinc finger, ZZ-type superfamily
IPR013178 Histone acetyltransferase Rtt109/CBP
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR000433 Zinc finger, ZZ-type
IPR011011 Zinc finger, FYVE/PHD-type
IPR000197 Zinc finger, TAZ-type
Mapman id Description
12.3.1.2 Chromatin organisation.post-translational histone modification.histone acetylation.histone acetyltransferase (HAC/HPCAT)