Gene: AT1G55550

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G55550
  • Transcript Identifier AT1G55550.1
  • Gene Type Coding gene
  • Location Chr1 : 20748915-20752862 : positive

Gene Family Information

  • ID HOM05D000141
  • #Genes/#Species 2582/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G55550.1
  • uniprot F4I1T9

Descriptions

  • Description P-loop containing nucleoside triphosphate hydrolases superfamily protein
  • Computational description P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: mitochondrion; EXPRESSED IN: seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G27950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007018
IEA
GOA Databasemicrotubule-based movement
GO:0007018
IBA
Gene Ontologymicrotubule-based movement1
GO:0007018
IEA
InterPromicrotubule-based movement
GO:0030705
IBA
Gene Ontologycytoskeleton-dependent intracellular transport1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008017
IEA
GOA Databasemicrotubule binding
GO:0008017
IBA
Gene Ontologymicrotubule binding1
GO:0008017
IEA
InterPromicrotubule binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0008574
IBA
Gene Ontologyplus-end-directed microtubule motor activity1
GO:0016887
IBA
Gene OntologyATP hydrolysis activity1
GO:0003777
IBA
Gene Ontologymicrotubule motor activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
IDA
GOA Databasemitochondrion
GO:0005739
HDA
Gene Ontologymitochondrion2
GO:0005874
IEA
GOA Databasemicrotubule
GO:0005874
IBA
Gene Ontologymicrotubule1
GO:0005871
IBA
Gene Ontologykinesin complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001752 Kinesin motor domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR036961 Kinesin motor domain superfamily
Mapman id Description
20.1.3.12 Cytoskeleton organisation.microtubular network.Kinesin microtubule-based motor protein activities.motor protein (Kinesin-14)