Gene: AT1G53885
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G53885
- Transcript Identifier AT1G53885.1
- Gene Type Coding gene
- Location Chr1 : 20119798-20120277 : positive
Gene Family Information
- ID HOM05D000562
- #Genes/#Species 981/96
- Phylogenetic origin
- ID ORTHO05D000388
- #Genes/#Species 1013/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT1G53885.1
- uniprot P0DO11
Descriptions
- Description linoleate 9S-lipoxygenase-4 protein, putative (DUF581)
- Computational description Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT1G53903.1); Has 508 Blast hits to 508 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 508; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0071368 | IEP | Gene Ontology | cellular response to cytokinin stimulus | 1 |
| GO:1902074 | IEP | GOA Database | response to salt | |
| GO:0042594 | IEP | GOA Database | response to starvation | |
| GO:1905582 | IEP | GOA Database | response to mannose | |
| GO:0009737 | IEP | GOA Database | response to abscisic acid | |
| GO:0009744 | IEP | GOA Database | response to sucrose | |
| GO:0009749 | IEP | GOA Database | response to glucose | |
| GO:0034097 | IEP | GOA Database | response to cytokine |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003674 | ND | Gene Ontology | molecular_function | |
| GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | ISM | Gene Ontology | mitochondrion | |
| GO:0005737 | IDA IEA | GOA Database | cytoplasm | |
| GO:0005634 | IDA IEA | GOA Database | nucleus | |
| GO:0005829 | IDA | GOA Database | cytosol |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 27.3.3 | Multi-process regulation.SnRK1-kinase regulatory system.SnRK1-interacting factor (FLZ) |