Gene: AT1G53780

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G53780
  • Transcript Identifier AT1G53780.4
  • Gene Type Coding gene
  • Location Chr1 : 20074212-20077235 : negative

Gene Family Information

  • ID HOM05D000070
  • #Genes/#Species 3945/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G53780.4
  • uniprot Q9SSB4

Descriptions

  • Description 26S proteasome regulatory complex ATPase
  • Computational description peptidyl-prolyl cis-trans isomerases;hydrolases;nucleoside-triphosphatases;ATP binding;nucleotide binding;ATPases; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein folding, protein catabolic process; LOCATED IN: membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Cyclophilin-like (InterPro:IPR015891), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: regulatory particle triple-A 1A (TAIR:AT1G53750.1); Has 32848 Blast hits to 30585 proteins in 3159 species: Archae - 1478; Bacteria - 10290; Metazoa - 6090; Fungi - 3965; Plants - 3383; Viruses - 25; Other Eukaryotes - 7617 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045899
IBA
GOA Databasepositive regulation of RNA polymerase II transcription preinitiation complex assembly
GO:0000413
IEA
Gene Ontologyprotein peptidyl-prolyl isomerization
GO:0000413
IEA
InterProprotein peptidyl-prolyl isomerization
GO:0030163
IEA
Gene Ontologyprotein catabolic process
GO:0030163
IEA
InterProprotein catabolic process
GO:1901800
IEA
GOA Databasepositive regulation of proteasomal protein catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0003755
IEA
InterPropeptidyl-prolyl cis-trans isomerase activity
GO:0036402
IEA
Gene Ontologyproteasome-activating activity
GO:0036402
IEA
InterProproteasome-activating activity
GO:0017025
IBA
GOA DatabaseTBP-class protein binding
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
Gene Ontologycytoplasm
GO:0005737
IEA
InterProcytoplasm
GO:0008540
IBA
GOA Databaseproteasome regulatory particle, base subcomplex
GO:0000502
IEA
GOA Databaseproteasome complex
GO:0005634
IEA
GOA Databasenucleus
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR029000 Cyclophilin-like domain superfamily
IPR041569 AAA ATPase, AAA+ lid domain
IPR005937 26S proteasome regulatory subunit P45-like
IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
IPR003593 AAA+ ATPase domain
IPR003959 ATPase, AAA-type, core
Mapman id Description
19.2.5.2.1.1 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.ATPase components.regulatory component RPT1