Gene: AT1G53020

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G53020
  • Transcript Identifier AT1G53020.1
  • Gene Type Pseudo gene
  • Location Chr1 : 19751372-19753064 : negative

Gene Family Information

Gene Duplication Information

Labels

Identifiers

  • tid AT1G53020.1
  • symbol UBC26
  • Alias PFU3,HO2 FAMILY UBIQUITIN CONJUGATION ENZYME 3
  • full_name ubiquitin-conjugating enzyme 26
  • uniprot Q9C918

Descriptions

  • Description UBC26 (UBIQUITIN-CONJUGATING ENZYME 26); ubiquitin-protein ligase
  • Description pseudogene of Ubiquitin-conjugating enzyme family protein
  • Computational description UBIQUITIN-CONJUGATING ENZYME 26 (UBC26); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; EXPRESSED IN: sperm cell, leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: UBC25 (UBIQUITIN-CONJUGATING ENZYME 25); small conjugating protein ligase (TAIR:AT3G15355.1); Has 11322 Blast hits to 5128 proteins in 283 species: Archae - 0; Bacteria - 0; Metazoa - 5430; Fungi - 2052; Plants - 1903; Viruses - 35; Other Eukaryotes - 1902 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006301
IBA
Gene Ontologypostreplication repair1
GO:0070534
IBA
Gene Ontologyprotein K63-linked ubiquitination1
GO:0000209
IBA
Gene Ontologyprotein polyubiquitination1
GO:0016567
IEA
GOA Databaseprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061631
IEA
GOA Databaseubiquitin conjugating enzyme activity
GO:0061631
IBA
Gene Ontologyubiquitin conjugating enzyme activity1
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0005524
IEA
GOA DatabaseATP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM, IBA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
No InterPro domains detected for this gene.
No MapMan annotations defined for this gene.