Gene: AT1G52980

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G52980
  • Transcript Identifier AT1G52980.1
  • Gene Type Coding gene
  • Location Chr1 : 19737493-19740201 : positive

Gene Family Information

  • ID HOM05D003840
  • #Genes/#Species 181/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G52980.1
  • symbol AtNug2
  • Alias Nug2,nuclear/nucleolar GTPase 2
  • full_name nuclear/nucleolar GTPase 2
  • uniprot Q9C923

Descriptions

  • Description GTP-binding family protein
  • Computational description GTP-binding family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917), NGP1, N-terminal (InterPro:IPR012971); BEST Arabidopsis thaliana protein match is: GTP-binding family protein (TAIR:AT3G07050.1); Has 37841 Blast hits to 9407 proteins in 1963 species: Archae - 139; Bacteria - 33291; Metazoa - 1149; Fungi - 897; Plants - 387; Viruses - 125; Other Eukaryotes - 1853 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042254
IDA
Gene Ontologyribosome biogenesis1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003924
IDA
Gene OntologyGTPase activity1
GO:0003729
IDA
Gene OntologymRNA binding2
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0005730
IEA
GOA Databasenucleolus
GO:0005730
IBA
Gene Ontologynucleolus3
GO:0005730
IEA
InterPronucleolus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR012971 Nucleolar GTP-binding protein 2, N-terminal domain
IPR006073 GTP binding domain
IPR024929 Nucleolar GTP-binding protein 2
IPR023179 GTP-binding protein, orthogonal bundle domain superfamily
Mapman id Description
17.1.2.2.1.15 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.pre-60S ribosomal subunit nuclear assembly.regulatory GTPase (NUG2)