Gene: AT1G52100

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G52100
  • Transcript Identifier AT1G52100.3
  • Gene Type Coding gene
  • Location Chr1 : 19383665-19385123 : negative

Gene Family Information

  • ID HOM05D000956
  • #Genes/#Species 627/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G52100.3
  • uniprot Q5XF82

Descriptions

  • Description Mannose-binding lectin superfamily protein
  • Computational description Mannose-binding lectin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: shoot, cotyledon, hypocotyl, leaf; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT5G35940.1); Has 1742 Blast hits to 773 proteins in 43 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 4; Plants - 1729; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030246
IEA
GOA Databasecarbohydrate binding
GO:0030246
IEA
InterProcarbohydrate binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001229 Jacalin-like lectin domain
IPR036404 Jacalin-like lectin domain superfamily
IPR033734 Jacalin-like lectin domain, plant
Mapman id Description
35.1 not assigned.annotated