Gene: AT1G50050

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G50050
  • Transcript Identifier AT1G50050.1
  • Gene Type Coding gene
  • Location Chr1 : 18546165-18549046 : positive

Gene Family Information

  • ID HOM05D000217
  • #Genes/#Species 1873/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G50050.1
  • uniprot F4I4X9

Descriptions

  • Description CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
  • Computational description CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Ves allergen (InterPro:IPR002413), Allergen V5/Tpx-1 related (InterPro:IPR001283), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein (TAIR:AT1G50060.1); Has 2391 Blast hits to 2360 proteins in 322 species: Archae - 0; Bacteria - 58; Metazoa - 1068; Fungi - 291; Plants - 913; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009607
IEA
GOA Databaseresponse to biotic stimulus

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0005615
IBA
Gene Ontologyextracellular space1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001283 Cysteine-rich secretory protein-related
IPR035940 CAP superfamily
IPR002413 Venom allergen 5-like
IPR014044 CAP domain
Mapman id Description
35.1 not assigned.annotated