Gene: AT1G49230

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G49230
  • Transcript Identifier AT1G49230.1
  • Gene Type Coding gene
  • Location Chr1 : 18209320-18209979 : positive

Gene Family Information

  • ID HOM05D000440
  • #Genes/#Species 1177/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G49230.1
  • Alias ATL78,Arabidopsis T%C3%B3xicos en Levadura 78,AtATL78
  • uniprot Q6NQG7

Descriptions

  • Description RING/U-box superfamily protein
  • Computational description RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G49200.1); Has 9168 Blast hits to 9144 proteins in 279 species: Archae - 0; Bacteria - 0; Metazoa - 2452; Fungi - 610; Plants - 4926; Viruses - 41; Other Eukaryotes - 1139 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
Gene Ontologyprotein ubiquitination
GO:0016567
IEA
InterProprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016740
IEA
InterProtransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044602 RING-H2 finger protein ATL10/ATL75-79
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR001841 Zinc finger, RING-type
Mapman id Description
19.2.2.1.4.3.3.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ATL-subclass ligase