Gene: AT1G47230
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G47230
- Transcript Identifier AT1G47230.1
- Gene Type Coding gene
- Location Chr1 : 17306752-17308587 : positive
Gene Family Information
- ID HOM05D000552
- #Genes/#Species 993/100
- Phylogenetic origin
- ID ORTHO05D000469
- #Genes/#Species 893/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G47230.1
- symbol CYCA3%3B4
- full_name CYCLIN A3%3B4
- uniprot Q3ECW2
Descriptions
- Description CYCLIN A3;4
- Computational description CYCLIN A3;4 (CYCA3;4); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin (InterPro:IPR006670), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400); BEST Arabidopsis thaliana protein match is: cyclin-dependent protein kinase 3;2 (TAIR:AT1G47210.2); Has 4301 Blast hits to 4300 proteins in 367 species: Archae - 0; Bacteria - 0; Metazoa - 1966; Fungi - 532; Plants - 1110; Viruses - 34; Other Eukaryotes - 659 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0044772 | IBA | Gene Ontology | mitotic cell cycle phase transition | 1 |
| GO:0000079 | IBA | Gene Ontology | regulation of cyclin-dependent protein serine/threonine kinase activity | 1 |
| GO:0007049 | IEA | GOA Database | cell cycle | |
| GO:0051301 | IEA | GOA Database | cell division | |
| GO:0009739 | ISO | PLAZA Integrative Orthology | response to gibberellin | Solyc12g088530.2 |
| GO:0007346 | ISO | PLAZA Integrative Orthology | regulation of mitotic cell cycle | Solyc12g088470.3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IPI | Gene Ontology | protein binding | 2 |
| GO:0016538 | IBA | Gene Ontology | cyclin-dependent protein serine/threonine kinase regulator activity | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IDA IBA | Gene Ontology | nucleus | 1 3 |
| GO:0000307 | IBA | Gene Ontology | cyclin-dependent protein kinase holoenzyme complex | 1 |
| GO:0005737 | IBA | Gene Ontology | cytoplasm | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 13.1.1.1.1 | Cell cycle organisation.cell cycle control.cyclin-dependent regulation.cyclin activities.cyclin (CYCA) |