Gene: AT1G47056

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G47056
  • Transcript Identifier AT1G47056.1
  • Gene Type Coding gene
  • Location Chr1 : 17276103-17277659 : negative

Gene Family Information

  • ID HOM05D001905
  • #Genes/#Species 345/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G47056.1
  • symbol VFB1
  • full_name VIER F-box proteine 1
  • uniprot Q9C626

Descriptions

  • Description VIER F-box protein 1
  • Computational description VIER F-box proteine 1 (VFB1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: stomatal complex, sepal, root, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: VIER F-box proteine 3 (TAIR:AT4G07400.1); Has 4631 Blast hits to 2722 proteins in 229 species: Archae - 0; Bacteria - 68; Metazoa - 1574; Fungi - 394; Plants - 2158; Viruses - 0; Other Eukaryotes - 437 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0016567
ISS
Gene Ontologyprotein ubiquitination1
GO:0031146
IBA
Gene OntologySCF-dependent proteasomal ubiquitin-dependent protein catabolic process2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
ISS
Gene Ontologyubiquitin-protein transferase activity1
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0019005
IBA
Gene OntologySCF ubiquitin ligase complex2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032675 Leucine-rich repeat domain superfamily
IPR006553 Leucine-rich repeat, cysteine-containing subtype
IPR001611 Leucine-rich repeat
IPR001810 F-box domain
Mapman id Description
19.2.2.8.1.4.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.F-BOX substrate adaptor activities.substrate adaptor (FBX)