Gene: AT1G43640

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G43640
  • Transcript Identifier AT1G43640.1
  • Gene Type Coding gene
  • Location Chr1 : 16439619-16441253 : negative

Gene Family Information

  • ID HOM05D000472
  • #Genes/#Species 1118/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G43640.1
  • symbol TLP5
  • Alias AtTLP5,tubby like protein 5
  • uniprot Q944S3

Descriptions

  • Description tubby like protein 5
  • Computational description tubby like protein 5 (TLP5); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 1 (TAIR:AT1G76900.2); Has 930 Blast hits to 929 proteins in 116 species: Archae - 0; Bacteria - 0; Metazoa - 348; Fungi - 19; Plants - 462; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
TAS
Gene Ontologyregulation of transcription, DNA-templated1
GO:0009620
IMP
Gene Ontologyresponse to fungus2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR025659 Tubby-like, C-terminal
IPR000007 Tubby, C-terminal
IPR001810 F-box domain
Mapman id Description
15.5.21 RNA biosynthesis.transcriptional regulation.transcription factor (TUB)