Gene: AT1G32870
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G32870
- Transcript Identifier AT1G32870.1
- Gene Type Coding gene
- Location Chr1 : 11911745-11913692 : positive
Gene Family Information
- ID HOM05D000010
- #Genes/#Species 9383/97
- Phylogenetic origin
- ID ORTHO05D004316
- #Genes/#Species 184/85
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT1G32870.1
- symbol NAC13
- Alias ANAC013,Arabidopsis NAC domain containing protein 13,ANAC13,NAC domain protein 13
- uniprot F4IED2
Descriptions
- Description NAC domain protein 13
- Computational description NAC domain protein 13 (NAC13); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 16 (TAIR:AT1G34180.1); Has 2951 Blast hits to 2946 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 2931; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031930 | IDA | Gene Ontology | mitochondria-nucleus signaling pathway | 1 |
| GO:0006355 | IEA | Gene Ontology | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:1900409 | IDA | Gene Ontology | positive regulation of cellular response to oxidative stress | 1 |
| GO:0010224 | IEP | Gene Ontology | response to UV-B | 2 |
| GO:0010114 | IEP | Gene Ontology | response to red light | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | Gene Ontology | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0000976 | IPI | Gene Ontology | transcription cis-regulatory region binding | 3 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 4 |
| GO:0003700 | IDA ISS | Gene Ontology | DNA-binding transcription factor activity | 1 5 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005783 | IEA | GOA Database | endoplasmic reticulum | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005789 | IEA | GOA Database | endoplasmic reticulum membrane | |
| GO:0005789 | IDA | Gene Ontology | endoplasmic reticulum membrane | 1 |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA ISM | Gene Ontology | nucleus | 6 |
| GO:0005737 | IDA | Gene Ontology | cytoplasm | 6 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.17 | RNA biosynthesis.transcriptional regulation.transcription factor (NAC) |