Gene: AT1G32170

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G32170
  • Transcript Identifier AT1G32170.1
  • Gene Type Coding gene
  • Location Chr1 : 11575434-11577776 : positive

Gene Family Information

  • ID HOM05D000066
  • #Genes/#Species 3967/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G32170.1
  • symbol XTH30
  • Alias XTR4,xyloglucan endotransglycosylase 4
  • uniprot Q38908

Descriptions

  • Description xyloglucan endotransglucosylase/hydrolase 30
  • Computational description xyloglucan endotransglucosylase/hydrolase 30 (XTH30); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 29 (TAIR:AT4G18990.1); Has 2058 Blast hits to 2046 proteins in 299 species: Archae - 2; Bacteria - 244; Metazoa - 0; Fungi - 398; Plants - 1344; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0042546
IEA
Gene Ontologycell wall biogenesis
GO:0042546
IEA
InterProcell wall biogenesis
GO:0010411
IEA
Gene Ontologyxyloglucan metabolic process
GO:0010411
IEA
InterProxyloglucan metabolic process
GO:0006073
IEA
GOA Databasecellular glucan metabolic process
GO:0006073
IEA
InterProcellular glucan metabolic process
GO:0008152
IEA
GOA Databasemetabolic process
GO:0071555
IEA
GOA Databasecell wall organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004553
IEA
Gene Ontologyhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016762
IEA
Gene Ontologyxyloglucan:xyloglucosyl transferase activity
GO:0016762
IEA
InterProxyloglucan:xyloglucosyl transferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
IEA
GOA Databaseextracellular region
GO:0048046
IEA
GOA Databaseapoplast
GO:0048046
IEA
InterProapoplast
GO:0005618
IEA
GOA Databasecell wall
GO:0005618
IEA
InterProcell wall

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010713 Xyloglucan endo-transglycosylase, C-terminal
IPR016455 Xyloglucan endotransglucosylase/hydrolase
IPR000757 Glycoside hydrolase family 16
IPR044791 Beta-glucanase/XTH
IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
Mapman id Description
50.2.4 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase