Gene: AT1G30690
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G30690
- Transcript Identifier AT1G30690.2
- Gene Type Coding gene
- Location Chr1 : 10888284-10890085 : positive
Gene Family Information
- ID HOM05D000672
- #Genes/#Species 853/98
- Phylogenetic origin
- ID ORTHO05D000522
- #Genes/#Species 815/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT1G30690.2
- uniprot Q94C59
Descriptions
- Description Sec14p-like phosphatidylinositol transfer family protein
- Computational description Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), GOLD (InterPro:IPR009038), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein (TAIR:AT4G09160.1); Has 58641 Blast hits to 33210 proteins in 2176 species: Archae - 407; Bacteria - 9659; Metazoa - 18729; Fungi - 5495; Plants - 3007; Viruses - 390; Other Eukaryotes - 20954 (source: NCBI BLink).
- Computational description Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), GOLD (InterPro:IPR009038), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein (TAIR:AT4G09160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0071365 | IGI | Gene Ontology | cellular response to auxin stimulus | 1 |
| GO:1901703 | IGI | Gene Ontology | protein localization involved in auxin polar transport | 1 |
| GO:0007049 | IEA | GOA Database | cell cycle | |
| GO:0051301 | IEA | GOA Database | cell division |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008289 | IEA | GOA Database | lipid binding | |
| GO:0008289 | IEA | InterPro | lipid binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IDA | GOA Database | nucleus | |
| GO:0005634 | HDA ISM | Gene Ontology | nucleus | 2 |
| GO:0005886 | IDA | GOA Database | plasma membrane | |
| GO:0005886 | HDA | Gene Ontology | plasma membrane | 3 |
| GO:0005829 | IDA | GOA Database | cytosol | |
| GO:0005829 | HDA | Gene Ontology | cytosol | 4 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005737 | IEA | GOA Database | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |