Gene: AT1G29970

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G29970
  • Transcript Identifier AT1G29970.2
  • Gene Type Coding gene
  • Location Chr1 : 10498458-10501311 : negative

Gene Family Information

  • ID HOM05D001706
  • #Genes/#Species 380/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G29970.2
  • symbol RPL18AA
  • uniprot A8MRF3

Descriptions

  • Description 60S ribosomal protein L18A-1
  • Computational description 60S ribosomal protein L18A-1 (RPL18AA); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae family (TAIR:AT1G17080.1); Has 128 Blast hits to 128 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
  • Computational description 60S ribosomal protein L18A-1 (RPL18AA); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L18ae/LX (InterPro:IPR021138), Ribosomal protein L18ae (InterPro:IPR002670); BEST Arabidopsis thaliana protein match is: Ribosomal protein L18ae/LX family protein (TAIR:AT1G29965.1); Has 869 Blast hits to 867 proteins in 280 species: Archae - 0; Bacteria - 0; Metazoa - 315; Fungi - 155; Plants - 265; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
Gene Ontologytranslation
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
Gene Ontologystructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003729
IDA
Gene OntologymRNA binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005829
RCA
Gene Ontologycytosol2
GO:0005634
HDA
Gene Ontologynucleus3
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G29965
GO:0022625
ISO
PLAZA Integrative Orthologycytosolic large ribosomal subunit AT1G29965

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023573 Ribosomal protein 50S-L18Ae/60S-L20/60S-L18A
IPR028877 50S ribosomal protein L18Ae/60S ribosomal protein L20 and L18a
Mapman id Description
17.1.2.1.19 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL18a