Gene: AT1G29420
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G29420
- Transcript Identifier AT1G29420.2
- Gene Type Coding gene
- Location Chr1 : 10301483-10302028 : negative
Gene Family Information
- ID HOM05D000695
- #Genes/#Species 819/82
- Phylogenetic origin
- ID ORTHO05D000615
- #Genes/#Species 739/81
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT1G29420.2
- Alias SAUR61,SMALL AUXIN UPREGULATED RNA 61
- uniprot Q6NMM0
Descriptions
- Description SAUR-like auxin-responsive protein family
- Computational description SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G29510.1); Has 732 Blast hits to 717 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 732; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009733 | IEA | Gene Ontology | response to auxin | |
| GO:0009733 | IEA | InterPro | response to auxin | |
| GO:0040008 | IEA | GOA Database | regulation of growth | |
| GO:0009734 | IEA | GOA Database | auxin-activated signaling pathway | |
| GO:2000012 | ISO | PLAZA Integrative Orthology | regulation of auxin polar transport | Os09g0545300 |
| GO:0046621 | ISO | PLAZA Integrative Orthology | negative regulation of organ growth | Os09g0545300 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003674 | ND | Gene Ontology | molecular_function |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | ISM | Gene Ontology | mitochondrion | |
| GO:0005886 | IEA | GOA Database | plasma membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | Os09g0545300 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003676 | Small auxin-up RNA |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |