Gene: AT1G26260

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G26260
  • Transcript Identifier AT1G26260.4
  • Gene Type Coding gene
  • Location Chr1 : 9087214-9089035 : positive

Gene Family Information

  • ID HOM05D000194
  • #Genes/#Species 2004/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G26260.4
  • symbol CIB5
  • uniprot Q9C670

Descriptions

  • Description cryptochrome-interacting basic-helix-loop-helix 5
  • Computational description cryptochrome-interacting basic-helix-loop-helix 5 (CIB5); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of flower development, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G68920.3); Has 2014 Blast hits to 2008 proteins in 104 species: Archae - 0; Bacteria - 3; Metazoa - 32; Fungi - 24; Plants - 1947; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
TAS, IEA
Gene Ontologyregulation of transcription, DNA-templated1
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009911
IGI
Gene Ontologypositive regulation of flower development2
GO:0009637
IDA
Gene Ontologyresponse to blue light3
GO:0040008
IEA
GOA Databaseregulation of growth

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
Gene Ontologyprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003700
ISS, IBA
Gene OntologyDNA-binding transcription factor activity1 4
GO:0005515
IPI
Gene Ontologyprotein binding3
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus4

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036638 Helix-loop-helix DNA-binding domain superfamily
IPR024097 Basic helix-loop-helix leucine zipper transcription factor
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)
26.1.2.1.2 External stimuli response.light.UV-A/blue light.cryptochrome-mediated photoperception.transcriptional regulator (CIB)