Gene: AT1G21540

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G21540
  • Transcript Identifier AT1G21540.1
  • Gene Type Coding gene
  • Location Chr1 : 7548758-7550521 : negative

Gene Family Information

  • ID HOM05D000356
  • #Genes/#Species 1336/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G21540.1
  • uniprot Q9LPK6

Descriptions

  • Description AMP-dependent synthetase and ligase family protein
  • Computational description AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT1G21530.2); Has 76629 Blast hits to 70171 proteins in 3593 species: Archae - 1132; Bacteria - 50179; Metazoa - 3309; Fungi - 3660; Plants - 2281; Viruses - 1; Other Eukaryotes - 16067 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006629
IEA
GOA Databaselipid metabolic process
GO:0006631
IEA
GOA Databasefatty acid metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016874
IEA
GOA Databaseligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR025110 AMP-binding enzyme, C-terminal domain
IPR000873 AMP-dependent synthetase/ligase
IPR042099 ANL, N-terminal domain
Mapman id Description
35.1 not assigned.annotated