Gene: AT1G20480

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G20480
  • Transcript Identifier AT1G20480.1
  • Gene Type Coding gene
  • Location Chr1 : 7094978-7097073 : negative

Gene Family Information

  • ID HOM05D000169
  • #Genes/#Species 2209/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G20480.1
  • uniprot Q84P25

Descriptions

  • Description AMP-dependent synthetase and ligase family protein
  • Computational description AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: 4-coumarate-CoA ligase activity; INVOLVED IN: phenylpropanoid metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: OPC-8:0 CoA ligase1 (TAIR:AT1G20510.1); Has 83252 Blast hits to 75672 proteins in 3756 species: Archae - 1173; Bacteria - 54045; Metazoa - 3530; Fungi - 4633; Plants - 2807; Viruses - 1; Other Eukaryotes - 17063 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016207
ISS
Gene Ontology4-coumarate-CoA ligase activity
GO:0016405
IBA
Gene OntologyCoA-ligase activity1
GO:0016874
IEA
GOA Databaseligase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005524
IEA
GOA DatabaseATP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISM
Gene Ontologymitochondrion
GO:0005777
IEA
GOA Databaseperoxisome
GO:0005777
IBA
Gene Ontologyperoxisome1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR042099 ANL, N-terminal domain
IPR000873 AMP-dependent synthetase/ligase
IPR025110 AMP-binding enzyme, C-terminal domain
Mapman id Description
11.7.1.7 Phytohormone action.jasmonic acid.biosynthesis.OPC-8:CoA synthetase (ACS)