Gene: AT1G20220
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G20220
- Transcript Identifier AT1G20220.1
- Gene Type Coding gene
- Location Chr1 : 7005090-7007285 : negative
Gene Family Information
- ID HOM05D000901
- #Genes/#Species 665/99
- Phylogenetic origin
- ID ORTHO05D001160
- #Genes/#Species 471/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G20220.1
- uniprot Q944A2
Descriptions
- Description Alba DNA/RNA-binding protein
- Computational description Alba DNA/RNA-binding protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alba, DNA/RNA-binding protein (InterPro:IPR002775); BEST Arabidopsis thaliana protein match is: Alba DNA/RNA-binding protein (TAIR:AT1G76010.1); Has 46942 Blast hits to 19054 proteins in 1334 species: Archae - 23; Bacteria - 15382; Metazoa - 15943; Fungi - 3395; Plants - 5072; Viruses - 633; Other Eukaryotes - 6494 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008150 | ND | Gene Ontology | biological_process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | IDA, HDA | Gene Ontology | mRNA binding | 1 2 |
| GO:0003723 | IBA | Gene Ontology | RNA binding | 3 |
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | HDA ISM | Gene Ontology | nucleus | 4 |
| GO:0009505 | IDA | GOA Database | plant-type cell wall | |
| GO:0009505 | HDA | Gene Ontology | plant-type cell wall | 5 |
| GO:0009506 | IDA | GOA Database | plasmodesma | |
| GO:0009506 | HDA | Gene Ontology | plasmodesma | 6 |
| GO:0005829 | IDA | GOA Database | cytosol |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.6.3.6 | RNA processing.ribonuclease activities.RNA-dependent RNase P complex.component RPP25/POP6 or RPP20/POP7 |