Gene: AT1G20020

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G20020
  • Transcript Identifier AT1G20020.1
  • Gene Type Coding gene
  • Location Chr1 : 6942851-6944868 : positive

Gene Family Information

  • ID HOM05D000565
  • #Genes/#Species 980/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G20020.1
  • symbol FNR2
  • Alias ATLFNR2,LEAF FNR 2,LFNR2,leaf-type chloroplast-targeted FNR 2
  • full_name ferredoxin-NADP(+)-oxidoreductase 2
  • uniprot Q8W493

Descriptions

  • Description ferredoxin-NADP -oxidoreductase 2
  • Computational description ferredoxin-NADP( )-oxidoreductase 2 (FNR2); FUNCTIONS IN: oxidoreductase activity, poly(U) RNA binding, NADPH dehydrogenase activity; INVOLVED IN: oxidation reduction, defense response to fungus, incompatible interaction, defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase FAD/NAD(P)-binding (InterPro:IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Oxidoreductase, FAD-binding domain (InterPro:IPR008333), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferredoxin Reductase (InterPro:IPR015701), Flavoprotein pyridine nucleotide cytochrome reductase (InterPro:IPR001709), Ferredoxin--NADP reductase (InterPro:IPR012146); BEST Arabidopsis thaliana protein match is: ferredoxin-NADP( )-oxidoreductase 1 (TAIR:AT5G66190.1); Has 6774 Blast hits to 6774 proteins in 1708 species: Archae - 20; Bacteria - 3604; Metazoa - 802; Fungi - 759; Plants - 616; Viruses - 0; Other Eukaryotes - 973 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042742
IEP
GOA Databasedefense response to bacterium
GO:0007166
ISO
PLAZA Homology (enrichment)cell surface receptor signaling pathway HOM05D000565
GO:0022900
ISO
PLAZA Integrative Orthologyelectron transport chain Zm00001eb379240
GO:0015979
IEA
Gene Ontologyphotosynthesis
GO:0050832
IDA
Gene Ontologydefense response to fungus1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016491
IEA
InterProoxidoreductase activity
GO:0003954
ISO
PLAZA Integrative OrthologyNADH dehydrogenase activity Zm00001eb379240
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Zm00001eb379240
GO:0009055
ISO
PLAZA Integrative Orthologyelectron transfer activity Zm00001eb379240
GO:0016653
ISO
PLAZA Integrative Orthologyoxidoreductase activity, acting on NAD(P)H, heme protein as acceptor Zm00001eb379240
GO:0004324
IEA
Gene Ontologyferredoxin-NADP+ reductase activity
GO:0003959
IDA
Gene OntologyNADPH dehydrogenase activity
GO:0008266
IDA
Gene Ontologypoly(U) RNA binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast3
GO:0048046
IDA
GOA Databaseapoplast
GO:0048046
HDA
Gene Ontologyapoplast4
GO:0009579
IDA
IEA
GOA Databasethylakoid
GO:0009579
HDA
Gene Ontologythylakoid5
GO:0009534
IDA
GOA Databasechloroplast thylakoid
GO:0009534
HDA
Gene Ontologychloroplast thylakoid6
GO:0009536
IEA
GOA Databaseplastid
GO:0009535
IEA
GOA Databasechloroplast thylakoid membrane
GO:0009535
IDA, HDA
Gene Ontologychloroplast thylakoid membrane7
GO:0009570
IEA
GOA Databasechloroplast stroma
GO:0009570
IDA, HDA
Gene Ontologychloroplast stroma8
GO:0098807
ISS
Gene Ontologychloroplast thylakoid membrane protein complex
GO:0005829
RCA
Gene Ontologycytosol9
GO:0005634
HDA
Gene Ontologynucleus10

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain
IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase
IPR015701 Ferredoxin--NADP reductase
IPR001433 Oxidoreductase FAD/NAD(P)-binding
IPR017938 Riboflavin synthase-like beta-barrel
IPR035442 Ferredoxin--NADP reductase, plant and Cyanobacteria type
Mapman id Description
1.1.5.2.1 Photosynthesis.photophosphorylation.linear electron flow.ferredoxin-NADP reductase (FNR) activity.ferredoxin-NADP oxidoreductase