Gene: AT1G18400

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G18400
  • Transcript Identifier AT1G18400.2
  • Gene Type Coding gene
  • Location Chr1 : 6331464-6333119 : positive

Gene Family Information

  • ID HOM05D000194
  • #Genes/#Species 2004/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G18400.2
  • symbol BEE1
  • uniprot Q8GZ13

Descriptions

  • Description BR enhanced expression 1
  • Computational description BR enhanced expression 1 (BEE1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: BR enhanced expression 3 (TAIR:AT1G73830.1); Has 2046 Blast hits to 2038 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 35; Plants - 1999; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IMP
Gene Ontologytranscription, DNA-templated1
GO:0006355
TAS, IEA
Gene Ontologyregulation of transcription, DNA-templated2
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:2000762
IMP
Gene Ontologyregulation of phenylpropanoid metabolic process3
GO:1902448
IMP
Gene Ontologypositive regulation of shade avoidance1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
ISS, IBA
IEA
Gene OntologyDNA-binding transcription factor activity2 4
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0046983
IEA
Gene Ontologyprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IDA
Gene OntologyDNA binding1
GO:0005515
IPI
Gene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM, IBA
Gene Ontologynucleus1 4

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
IPR024097 Basic helix-loop-helix leucine zipper transcription factor
IPR036638 Helix-loop-helix DNA-binding domain superfamily
IPR031064 Basic helix-loop-helix (bHLH) transcription factors BEE-like, plant
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)
26.1.2.1.2 External stimuli response.light.UV-A/blue light.cryptochrome-mediated photoperception.transcriptional regulator (CIB)