Gene: AT1G17310

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G17310
  • Transcript Identifier AT1G17310.2
  • Gene Type Coding gene
  • Location Chr1 : 5928014-5928700 : negative

Gene Family Information

  • ID HOM05D000203
  • #Genes/#Species 1948/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G17310.2
  • uniprot Q9LN16

Descriptions

  • Description MADS-box transcription factor family protein
  • Computational description MADS-box transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: antipodal cell, sperm cell, carpel, female gametophyte; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: MADS-box transcription factor family protein (TAIR:AT1G72350.1); Has 5468 Blast hits to 5468 proteins in 649 species: Archae - 0; Bacteria - 0; Metazoa - 628; Fungi - 303; Plants - 4468; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045944
IEA
Gene Ontologypositive regulation of transcription by RNA polymerase II
GO:0045944
IEA
InterPropositive regulation of transcription by RNA polymerase II
GO:0006357
IBA
Gene Ontologyregulation of transcription by RNA polymerase II1
GO:0006355
ISS
Gene Ontologyregulation of transcription, DNA-templated2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000981
IBA
IEA
Gene OntologyDNA-binding transcription factor activity, RNA polymerase II-specific1
GO:0000981
IEA
InterProDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0000987
IEA
Gene Ontologycis-regulatory region sequence-specific DNA binding
GO:0000987
IEA
InterProcis-regulatory region sequence-specific DNA binding
GO:0046983
IEA
Gene Ontologyprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0000978
IBA
Gene OntologyRNA polymerase II cis-regulatory region sequence-specific DNA binding1
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding3
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002100 Transcription factor, MADS-box
IPR036879 Transcription factor, MADS-box superfamily
IPR033897 MADS SRF-like
Mapman id Description
15.5.14 RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)