Gene: AT1G17050

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G17050
  • Transcript Identifier AT1G17050.1
  • Gene Type Coding gene
  • Location Chr1 : 5829289-5831215 : positive

Gene Family Information

  • ID HOM05D001752
  • #Genes/#Species 370/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G17050.1
  • symbol SPS2
  • Alias AtSPS2
  • uniprot Q76FS5

Descriptions

  • Description solanesyl diphosphate synthase 2
  • Computational description solanesyl diphosphate synthase 2 (SPS2); FUNCTIONS IN: trans-octaprenyltranstransferase activity; INVOLVED IN: ubiquinone biosynthetic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Solanesyl diphosphate synthase (InterPro:IPR014120), Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: solanesyl diphosphate synthase 1 (TAIR:AT1G78510.1); Has 16766 Blast hits to 16738 proteins in 2950 species: Archae - 341; Bacteria - 9538; Metazoa - 427; Fungi - 613; Plants - 416; Viruses - 0; Other Eukaryotes - 5431 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010236
IMP
IBA
Gene Ontologyplastoquinone biosynthetic process1 2
GO:0008299
IEA
GOA Databaseisoprenoid biosynthetic process
GO:0008299
IBA
Gene Ontologyisoprenoid biosynthetic process1
GO:0008299
IEA
InterProisoprenoid biosynthetic process
GO:0006744
IMP
Gene Ontologyubiquinone biosynthetic process2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Os05g0582300
GO:0004337
ISO
PLAZA Integrative Orthologygeranyltranstransferase activity Os05g0582300
GO:0016740
IEA
GOA Databasetransferase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0004659
IBA
Gene Ontologyprenyltransferase activity1
GO:0050347
IGI
Gene Ontologytrans-octaprenyltranstransferase activity3
GO:0052924
IEA
Gene Ontologyall-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009536
IEA
GOA Databaseplastid
GO:0009536
IDA
Gene Ontologyplastid3
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM, IBA
Gene Ontologychloroplast1 4
GO:0009570
IDA
GOA Databasechloroplast stroma
GO:0009570
HDA
Gene Ontologychloroplast stroma5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000092 Polyprenyl synthetase
IPR008949 Isoprenoid synthase domain superfamily
Mapman id Description
7.8.2.1 Coenzyme metabolism.prenylquinone biosynthesis.solanesyl diphosphate synthase activities.solanesyl diphosphate synthase (SPS1/2)