Gene: AT1G17020
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G17020
- Transcript Identifier AT1G17020.1
- Gene Type Coding gene
- Location Chr1 : 5820258-5821741 : positive
Gene Family Information
- ID HOM05D000018
- #Genes/#Species 7046/99
- Phylogenetic origin
- ID ORTHO05D000187
- #Genes/#Species 1447/92
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G17020.1
- symbol SRG1
- Alias ATSRG1,SENESCENCE-RELATED GENE 1
- uniprot Q39224
Descriptions
- Description senescence-related gene 1
- Computational description senescence-related gene 1 (SRG1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G17010.1); Has 8560 Blast hits to 8517 proteins in 996 species: Archae - 0; Bacteria - 1133; Metazoa - 115; Fungi - 988; Plants - 4970; Viruses - 0; Other Eukaryotes - 1354 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0010150 | IEP | Gene Ontology | leaf senescence | 1 |
GO:0009834 | ISO | PLAZA Integrative Orthology | plant-type secondary cell wall biogenesis | Os10g0558900 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0016682 | ISS | Gene Ontology | oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor | 1 |
GO:0046872 | IEA | GOA Database | metal ion binding | |
GO:0016491 | IEA | GOA Database | oxidoreductase activity |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005737 | ISM | Gene Ontology | cytoplasm |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
50.1.13 | Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen |