Gene: AT1G17020

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G17020
  • Transcript Identifier AT1G17020.1
  • Gene Type Coding gene
  • Location Chr1 : 5820258-5821741 : positive

Gene Family Information

  • ID HOM05D000018
  • #Genes/#Species 7046/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G17020.1
  • symbol SRG1
  • Alias ATSRG1,SENESCENCE-RELATED GENE 1
  • uniprot Q39224

Descriptions

  • Description senescence-related gene 1
  • Computational description senescence-related gene 1 (SRG1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G17010.1); Has 8560 Blast hits to 8517 proteins in 996 species: Archae - 0; Bacteria - 1133; Metazoa - 115; Fungi - 988; Plants - 4970; Viruses - 0; Other Eukaryotes - 1354 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010150
IEP
Gene Ontologyleaf senescence1
GO:0009834
ISO
PLAZA Integrative Orthologyplant-type secondary cell wall biogenesis Os10g0558900

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016682
ISS
Gene Ontologyoxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor1
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016491
IEA
GOA Databaseoxidoreductase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044861 Isopenicillin N synthase-like, Fe(2+) 2OG dioxygenase domain
IPR026992 Non-haem dioxygenase N-terminal domain
IPR027443 Isopenicillin N synthase-like superfamily
Mapman id Description
50.1.13 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen