Gene: AT1G16390

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G16390
  • Transcript Identifier AT1G16390.1
  • Gene Type Coding gene
  • Location Chr1 : 5602921-5604477 : positive

Gene Family Information

  • ID HOM05D000839
  • #Genes/#Species 711/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G16390.1
  • symbol OCT3
  • Alias ATOCT3,organic cation/carnitine transporter 3
  • uniprot Q9SA38

Descriptions

  • Description organic cation/carnitine transporter 3
  • Computational description organic cation/carnitine transporter 3 (3-Oct); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: organic cation/carnitine transporter 2 (TAIR:AT1G79360.1); Has 22920 Blast hits to 22877 proteins in 2010 species: Archae - 415; Bacteria - 11427; Metazoa - 4445; Fungi - 4126; Plants - 1629; Viruses - 0; Other Eukaryotes - 878 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0055085
IEA
Gene Ontologytransmembrane transport
GO:0055085
IEA
InterProtransmembrane transport
GO:0070417
IEP
Gene Ontologycellular response to cold1
GO:0006811
IEA
GOA Databaseion transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015144
ISS
Gene Ontologycarbohydrate transmembrane transporter activity
GO:0022857
IEA
Gene Ontologytransmembrane transporter activity
GO:0022857
IEA
InterProtransmembrane transporter activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005524
IEA
GOA DatabaseATP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0009705
IDA
Gene Ontologyplant-type vacuole membrane1
GO:0005774
IEA
GOA Databasevacuolar membrane
GO:0005773
IEA
GOA Databasevacuole
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IEA
InterProintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005828 Major facilitator, sugar transporter-like
IPR036259 MFS transporter superfamily
Mapman id Description
24.2.2.3.2 Solute transport.carrier-mediated transport.MFS superfamily.OCT family.organic cation transporter (OCT)