Gene: AT1G16360

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G16360
  • Transcript Identifier AT1G16360.2
  • Gene Type Coding gene
  • Location Chr1 : 5593493-5595793 : negative

Gene Family Information

  • ID HOM05D001323
  • #Genes/#Species 474/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G16360.2
  • uniprot Q9SA35

Descriptions

  • Description LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein
  • Computational description LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF284, transmembrane eukaryotic (InterPro:IPR005045); BEST Arabidopsis thaliana protein match is: ALA-interacting subunit 5 (TAIR:AT1G79450.1); Has 865 Blast hits to 864 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 234; Plants - 160; Viruses - 0; Other Eukaryotes - 219 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005634
HDA
Gene Ontologynucleus1
GO:0005794
IBA
Gene OntologyGolgi apparatus2
GO:0005783
IBA
Gene Ontologyendoplasmic reticulum2
GO:0005886
IBA
Gene Ontologyplasma membrane2
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005045 CDC50/LEM3 family
Mapman id Description
24.1.2.4.1.2 Solute transport.primary active transport.P-type ATPase superfamily.P4 family.phospholipid flippase complex.regulatory component ALIS
5.8.2.1.1.2 Lipid metabolism.lipid trafficking.endoplasmic reticulum-plastid lipid transfer.phospholipid transverse translocation.ALA-ALIS flippase complex.regulatory component ALIS