Gene: AT1G13890

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G13890
  • Transcript Identifier AT1G13890.1
  • Gene Type Coding gene
  • Location Chr1 : 4751581-4752844 : positive

Gene Family Information

  • ID HOM05D001913
  • #Genes/#Species 344/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G13890.1
  • symbol SNAP30
  • Alias ATSNAP30
  • uniprot Q9LMG8

Descriptions

  • Description soluble N-ethylmaleimide-sensitive factor adaptor protein 30
  • Computational description soluble N-ethylmaleimide-sensitive factor adaptor protein 30 (SNAP30); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: vesicle-mediated transport, cellular membrane fusion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, seedling growth, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727); BEST Arabidopsis thaliana protein match is: soluble N-ethylmaleimide-sensitive factor adaptor protein 33 (TAIR:AT5G61210.1); Has 915 Blast hits to 914 proteins in 177 species: Archae - 0; Bacteria - 2; Metazoa - 570; Fungi - 86; Plants - 163; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
TAS
Gene Ontologyvesicle-mediated transport1
GO:0061025
TAS
Gene Ontologymembrane fusion1
GO:0015031
IEA
GOA Databaseprotein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005484
IEA
GOA DatabaseSNAP receptor activity
GO:0005484
ISS
Gene OntologySNAP receptor activity1
GO:0005484
IEA
InterProSNAP receptor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0031201
IEA
Gene OntologySNARE complex
GO:0031201
IEA
InterProSNARE complex
GO:0005886
IBA
Gene Ontologyplasma membrane2
GO:0016020
IEA
GOA Databasemembrane
GO:0005737
IEA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000727 Target SNARE coiled-coil homology domain
IPR044766 NPSN/SNAP25-like, N-terminal SNARE domain
Mapman id Description
22.3.5.1.3.1 Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.Qbc-type SNARE components.SNAP25-group component