Gene: AT1G13810

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G13810
  • Transcript Identifier AT1G13810.1
  • Gene Type Coding gene
  • Location Chr1 : 4734088-4735164 : positive

Gene Family Information

  • ID HOM05D002802
  • #Genes/#Species 247/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G13810.1
  • uniprot Q5XVK9

Descriptions

  • Description Restriction endonuclease, type II-like superfamily protein
  • Computational description Restriction endonuclease, type II-like superfamily protein; FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: YqaJ viral recombinase family (InterPro:IPR019080), Exonuclease, phage-type/RecB, C-terminal (InterPro:IPR011604), Restriction endonuclease, type II-like (InterPro:IPR011335); BEST Arabidopsis thaliana protein match is: Restriction endonuclease, type II-like superfamily protein (TAIR:AT1G67660.1); Has 316 Blast hits to 315 proteins in 62 species: Archae - 0; Bacteria - 48; Metazoa - 55; Fungi - 0; Plants - 63; Viruses - 14; Other Eukaryotes - 136 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004519
IEA
GOA Databaseendonuclease activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005575
ND
Gene Ontologycellular_component

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR019080 YqaJ viral recombinase
IPR011604 Exonuclease, phage-type/RecB, C-terminal
IPR011335 Restriction endonuclease type II-like
Mapman id Description
35.1 not assigned.annotated