Gene: AT1G09660

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G09660
  • Transcript Identifier AT1G09660.1
  • Gene Type Coding gene
  • Location Chr1 : 3128032-3130791 : negative

Gene Family Information

  • ID HOM05D001024
  • #Genes/#Species 592/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G09660.1
  • uniprot Q8GWR3

Descriptions

  • Description RNA-binding KH domain-containing protein
  • Computational description RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K Homology (InterPro:IPR004087); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT4G26480.1); Has 1343 Blast hits to 1342 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 810; Fungi - 168; Plants - 277; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048024
IBA
Gene Ontologyregulation of mRNA splicing, via spliceosome1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IBA
Gene OntologymRNA binding1
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036612 K Homology domain, type 1 superfamily
IPR045071 KH domain-containing BBP-like
IPR032377 STAR protein, homodimerisation region
IPR004087 K Homology domain
Mapman id Description
35.1 not assigned.annotated