Gene: AT1G09200

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G09200
  • Transcript Identifier AT1G09200.1
  • Gene Type Coding gene
  • Location Chr1 : 2971722-2972132 : negative

Gene Family Information

  • ID HOM05D000288
  • #Genes/#Species 1531/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G09200.1
  • Alias H3.1,histone 3.1

Descriptions

  • Description Histone superfamily protein
  • Computational description Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: chloroplast, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G10400.1); Has 14599 Blast hits to 14591 proteins in 7243 species: Archae - 0; Bacteria - 0; Metazoa - 10602; Fungi - 2038; Plants - 1256; Viruses - 0; Other Eukaryotes - 703 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0046982
IEA
InterProprotein heterodimerization activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G65360

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005576
HDA
Gene Ontologyextracellular region1
GO:0000786
IEA
InterPronucleosome
GO:0010369
ISO
PLAZA Integrative Orthologychromocenter AT5G65360

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007125 Histone H2A/H2B/H3
IPR009072 Histone-fold
IPR000164 Histone H3/CENP-A
Mapman id Description
12.1.1.3 Chromatin organisation.chromatin structure.DNA wrapping.histone (H3)